Carnation DB

Dca61156.1

Annotation

11-exons
f-1
sp|D7M4U0_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_912074#unknown#0F0P0C
sp|G7ZZ42_MEDTR#Ribosome production factor#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_082s0025#unknown#0F0P0C
Repeat List (scaffold946)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61156.1	3	356	356	73.31	354	74	6e-146
Target_name	Start	End	Length	Cov(%)
sp\|D7M4U0_ARALL	2	347	347	99.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61156.1	8	356	356	69.94	349	72	2e-143
Target_name	Start	End	Length	Cov(%)
AT4G01560.1	4	343	343	99.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold946	Augus-PASA	mRNA	70597	73460	.	+	.	ID=Dca61156.1;Parent=Dca61156
scaffold946	Augus-PASA	exon	70597	70851	.	+	.	ID=Dca61156.1.exon1;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	70951	71031	.	+	.	ID=Dca61156.1.exon2;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	71146	71241	.	+	.	ID=Dca61156.1.exon3;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	71511	71594	.	+	.	ID=Dca61156.1.exon4;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	71695	71764	.	+	.	ID=Dca61156.1.exon5;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	71904	71986	.	+	.	ID=Dca61156.1.exon6;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	72094	72173	.	+	.	ID=Dca61156.1.exon7;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	72288	72386	.	+	.	ID=Dca61156.1.exon8;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	72474	72567	.	+	.	ID=Dca61156.1.exon9;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	73248	73337	.	+	.	ID=Dca61156.1.exon10;Parent=Dca61156.1
scaffold946	Augus-PASA	exon	73422	73460	.	+	.	ID=Dca61156.1.exon11;Parent=Dca61156.1