Carnation DB

Dca61557.1

Annotation

6-exons
f-1
sp|B9N0F0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_783184#GO:0005737;GO:0016788;GO:0003676;GO:0006310;GO:0006281#2F2P1C
AT1G12244.1 | Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:4157719-4158893 FORWARD LENGTH=254
Repeat List (scaffold96)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61557.1	39	257	264	58.33	219	68	8e-81
Target_name	Start	End	Length	Cov(%)
sp\|B9N0F0_POPTR	24	250	254	89.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61557.1	79	257	264	45.83	179	68	5e-61
Target_name	Start	End	Length	Cov(%)
AT1G12244.1	64	242	254	70.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold96	Augustus	mRNA	66994	70067	.	-	.	ID=Dca61557.1;Parent=Dca61557
scaffold96	Augustus	exon	66994	67128	.	-	.	ID=Dca61557.1.exon1;Parent=Dca61557.1
scaffold96	Augustus	exon	67295	67346	.	-	.	ID=Dca61557.1.exon2;Parent=Dca61557.1
scaffold96	Augustus	exon	68338	68406	.	-	.	ID=Dca61557.1.exon3;Parent=Dca61557.1
scaffold96	Augus-PASA	exon	68958	69070	.	-	.	ID=Dca61557.1.exon4;Parent=Dca61557.1
scaffold96	Augus-PASA	exon	69523	69582	.	-	.	ID=Dca61557.1.exon5;Parent=Dca61557.1
scaffold96	Augus-PASA	exon	69702	70067	.	-	.	ID=Dca61557.1.exon6;Parent=Dca61557.1