Dca6167.1
Annotation
- 3-exons
- f-1
- sp|B9HR78_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_649242#GO:0016021#0F0P1C
- AT4G38640.1 | Symbols: | Plasma-membrane choline transporter family protein | chr4:18059884-18062091 REVERSE LENGTH=556
- Repeat List (scaffold124)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6167.1 |
3 |
321 |
323 |
70.89 |
319 |
72 |
1e-135
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HR78_POPTR |
222 |
541 |
548 |
58.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6167.1 |
3 |
321 |
323 |
68.73 |
319 |
70 |
2e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G38640.1 |
230 |
549 |
556 |
57.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold124 |
Augustus |
mRNA |
325702 |
327364 |
. |
- |
. |
ID=Dca6167.1;Parent=Dca6167 |
| scaffold124 |
Augustus |
exon |
325702 |
325947 |
. |
- |
. |
ID=Dca6167.1.exon1;Parent=Dca6167.1 |
| scaffold124 |
Augustus |
exon |
326094 |
326436 |
. |
- |
. |
ID=Dca6167.1.exon2;Parent=Dca6167.1 |
| scaffold124 |
Augustus |
exon |
326982 |
327364 |
. |
- |
. |
ID=Dca6167.1.exon3;Parent=Dca6167.1 |
