Dca62000.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold976)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62000.1 |
1 |
305 |
404 |
31.68 |
305 |
36 |
9e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
239 |
577 |
1717 |
19.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62000.1 |
230 |
293 |
404 |
4.95 |
64 |
32 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
160 |
192 |
32.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold976 |
Augustus |
mRNA |
54916 |
58121 |
. |
+ |
. |
ID=Dca62000.1;Parent=Dca62000 |
| scaffold976 |
Augustus |
exon |
54916 |
55389 |
. |
+ |
. |
ID=Dca62000.1.exon1;Parent=Dca62000.1 |
| scaffold976 |
Augustus |
exon |
55489 |
55965 |
. |
+ |
. |
ID=Dca62000.1.exon2;Parent=Dca62000.1 |
| scaffold976 |
Augustus |
exon |
57858 |
58121 |
. |
+ |
. |
ID=Dca62000.1.exon3;Parent=Dca62000.1 |
