Carnation DB

Dca62046.1

Annotation

9-exons
f-1
sp|F6HS43_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0051g00380#GO:0016020#0F0P1C
AT2G33205.1 | Symbols: | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr2:14070987-14073211 REVERSE LENGTH=422
Repeat List (scaffold978)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62046.1	12	90	360	11.66	79	54	1e-19
Target_name	Start	End	Length	Cov(%)
sp\|F6HS43_VITVI	23	101	423	18.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62046.1	8	117	360	11.66	110	38	4e-15
Target_name	Start	End	Length	Cov(%)
AT2G33205.1	21	127	422	25.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold978	Augustus	mRNA	56447	62359	.	+	.	ID=Dca62046.1;Parent=Dca62046
scaffold978	Augustus	exon	56447	56645	.	+	.	ID=Dca62046.1.exon1;Parent=Dca62046.1
scaffold978	Augustus	exon	57079	57137	.	+	.	ID=Dca62046.1.exon2;Parent=Dca62046.1
scaffold978	Augustus	exon	58715	58788	.	+	.	ID=Dca62046.1.exon3;Parent=Dca62046.1
scaffold978	Augustus	exon	59106	59175	.	+	.	ID=Dca62046.1.exon4;Parent=Dca62046.1
scaffold978	Augus-PASA	exon	59638	59709	.	+	.	ID=Dca62046.1.exon5;Parent=Dca62046.1
scaffold978	Augus-PASA	exon	60031	60164	.	+	.	ID=Dca62046.1.exon6;Parent=Dca62046.1
scaffold978	Augus-PASA	exon	60255	60328	.	+	.	ID=Dca62046.1.exon7;Parent=Dca62046.1
scaffold978	Augustus	exon	60405	60442	.	+	.	ID=Dca62046.1.exon8;Parent=Dca62046.1
scaffold978	Augustus	exon	61997	62359	.	+	.	ID=Dca62046.1.exon9;Parent=Dca62046.1