Dca62254.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold985)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62254.1 |
1 |
573 |
581 |
41.65 |
573 |
34 |
4e-103
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
60 |
745 |
1501 |
45.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62254.1 |
293 |
573 |
581 |
17.03 |
281 |
32 |
3e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
118 |
434 |
707 |
44.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold985 |
Augustus |
mRNA |
78750 |
80786 |
. |
+ |
. |
ID=Dca62254.1;Parent=Dca62254 |
| scaffold985 |
Augustus |
exon |
78750 |
78845 |
. |
+ |
. |
ID=Dca62254.1.exon1;Parent=Dca62254.1 |
| scaffold985 |
Augustus |
exon |
78942 |
79760 |
. |
+ |
. |
ID=Dca62254.1.exon2;Parent=Dca62254.1 |
| scaffold985 |
Augustus |
exon |
79859 |
80387 |
. |
+ |
. |
ID=Dca62254.1.exon3;Parent=Dca62254.1 |
| scaffold985 |
Augustus |
exon |
80485 |
80786 |
. |
+ |
. |
ID=Dca62254.1.exon4;Parent=Dca62254.1 |
