Carnation DB

Dca62266.1

Annotation

5-exons
f-1
sp|B9I7R2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1096222#unknown#0F0P0C
sp|B9RF70_RICCO#Always early, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1431990#GO:0003677#1F0P0C
Repeat List (scaffold9858)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62266.1	89	301	323	42.1	213	64	2e-76
Target_name	Start	End	Length	Cov(%)
sp\|B9I7R2_POPTR	435	647	1007	21.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62266.1	82	302	323	35.91	221	52	3e-67
Target_name	Start	End	Length	Cov(%)
AT3G21430.2	541	764	1132	19.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9858	Augustus	mRNA	5346	6972	.	+	.	ID=Dca62266.1;Parent=Dca62266
scaffold9858	Augustus	exon	5346	5465	.	+	.	ID=Dca62266.1.exon1;Parent=Dca62266.1
scaffold9858	Augustus	exon	5813	6067	.	+	.	ID=Dca62266.1.exon2;Parent=Dca62266.1
scaffold9858	Augustus	exon	6166	6344	.	+	.	ID=Dca62266.1.exon3;Parent=Dca62266.1
scaffold9858	Augustus	exon	6441	6723	.	+	.	ID=Dca62266.1.exon4;Parent=Dca62266.1
scaffold9858	Augustus	exon	6838	6972	.	+	.	ID=Dca62266.1.exon5;Parent=Dca62266.1