Dca62431.1
Annotation
- 4-exons
- f-1
- sp|Q53NF5_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g08150#GO:0005634;GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P1C
- Repeat List (scaffold9907)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62431.1 |
2 |
695 |
701 |
55.92 |
694 |
53 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53NF5_ORYSJ |
628 |
1372 |
1416 |
52.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62431.1 |
532 |
665 |
701 |
6.56 |
134 |
34 |
3e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1276 |
1410 |
1539 |
8.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9907 |
Augustus |
mRNA |
8380 |
10907 |
. |
+ |
. |
ID=Dca62431.1;Parent=Dca62431 |
| scaffold9907 |
Augustus |
exon |
8380 |
8755 |
. |
+ |
. |
ID=Dca62431.1.exon1;Parent=Dca62431.1 |
| scaffold9907 |
Augustus |
exon |
8830 |
8960 |
. |
+ |
. |
ID=Dca62431.1.exon2;Parent=Dca62431.1 |
| scaffold9907 |
Augustus |
exon |
9048 |
10177 |
. |
+ |
. |
ID=Dca62431.1.exon3;Parent=Dca62431.1 |
| scaffold9907 |
Augustus |
exon |
10439 |
10907 |
. |
+ |
. |
ID=Dca62431.1.exon4;Parent=Dca62431.1 |
