Carnation DB

Dca62468.1

Annotation

11-exons
f-1
sp|B9T3H3_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1123640#unknown#0F0P0C
sp|D7KG50_ARALL#Binding protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_887862#unknown#0F0P0C
Repeat List (scaffold992)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62468.1	1	438	438	66.89	438	67	2e-160
Target_name	Start	End	Length	Cov(%)
sp\|B9T3H3_RICCO	467	906	917	47.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca62468.1	1	438	438	62.78	438	63	1e-144
Target_name	Start	End	Length	Cov(%)
AT1G06590.1	470	909	916	48.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold992	Augustus	mRNA	61840	68420	.	+	.	ID=Dca62468.1;Parent=Dca62468
scaffold992	Augustus	exon	61840	61881	.	+	.	ID=Dca62468.1.exon1;Parent=Dca62468.1
scaffold992	Augustus	exon	63907	63984	.	+	.	ID=Dca62468.1.exon2;Parent=Dca62468.1
scaffold992	Augustus	exon	64067	64323	.	+	.	ID=Dca62468.1.exon3;Parent=Dca62468.1
scaffold992	Augustus	exon	64729	64788	.	+	.	ID=Dca62468.1.exon4;Parent=Dca62468.1
scaffold992	Augustus	exon	64890	64957	.	+	.	ID=Dca62468.1.exon5;Parent=Dca62468.1
scaffold992	Augustus	exon	65118	65223	.	+	.	ID=Dca62468.1.exon6;Parent=Dca62468.1
scaffold992	Augustus	exon	65383	65524	.	+	.	ID=Dca62468.1.exon7;Parent=Dca62468.1
scaffold992	Augustus	exon	66260	66358	.	+	.	ID=Dca62468.1.exon8;Parent=Dca62468.1
scaffold992	Augustus	exon	66479	66743	.	+	.	ID=Dca62468.1.exon9;Parent=Dca62468.1
scaffold992	Augustus	exon	67768	67835	.	+	.	ID=Dca62468.1.exon10;Parent=Dca62468.1
scaffold992	Augustus	exon	68289	68420	.	+	.	ID=Dca62468.1.exon11;Parent=Dca62468.1