Dca62524.1
Annotation
- 4-exons
- f-1
- sp|B9IM67_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_578672#GO:0016020#0F0P1C
- Os09t0426500-01 Similar to Integral membrane protein DUF6 containing protein.
- Repeat List (scaffold995)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62524.1 |
4 |
157 |
171 |
46.19 |
154 |
52 |
6e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IM67_POPTR |
184 |
337 |
371 |
41.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca62524.1 |
4 |
168 |
171 |
46.19 |
165 |
48 |
3e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0426500-01 |
196 |
356 |
375 |
42.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold995 |
Augustus |
mRNA |
21994 |
23398 |
. |
+ |
. |
ID=Dca62524.1;Parent=Dca62524 |
| scaffold995 |
Augustus |
exon |
21994 |
22026 |
. |
+ |
. |
ID=Dca62524.1.exon1;Parent=Dca62524.1 |
| scaffold995 |
Augustus |
exon |
22142 |
22300 |
. |
+ |
. |
ID=Dca62524.1.exon2;Parent=Dca62524.1 |
| scaffold995 |
Augustus |
exon |
22664 |
22815 |
. |
+ |
. |
ID=Dca62524.1.exon3;Parent=Dca62524.1 |
| scaffold995 |
Augustus |
exon |
23227 |
23398 |
. |
+ |
. |
ID=Dca62524.1.exon4;Parent=Dca62524.1 |
