Dca6302.1
Annotation
- 4-exons
- f-1
- sp|B9HPM8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_721246#GO:0004046;GO:0008237;GO:0006520;GO:0006508#2F2P0C
- AT4G38220.2 | Symbols: | Peptidase M20/M25/M40 family protein | chr4:17925251-17926919 FORWARD LENGTH=433
- Repeat List (scaffold1247)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6302.1 |
98 |
252 |
255 |
46.66 |
155 |
77 |
8e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HPM8_POPTR |
78 |
232 |
448 |
34.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6302.1 |
98 |
252 |
255 |
41.56 |
155 |
69 |
8e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G38220.2 |
68 |
222 |
433 |
35.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1247 |
Augustus |
mRNA |
48759 |
57172 |
. |
+ |
. |
ID=Dca6302.1;Parent=Dca6302 |
| scaffold1247 |
Augustus |
exon |
48759 |
48861 |
. |
+ |
. |
ID=Dca6302.1.exon1;Parent=Dca6302.1 |
| scaffold1247 |
Augustus |
exon |
54984 |
55174 |
. |
+ |
. |
ID=Dca6302.1.exon2;Parent=Dca6302.1 |
| scaffold1247 |
Augustus |
exon |
55734 |
55901 |
. |
+ |
. |
ID=Dca6302.1.exon3;Parent=Dca6302.1 |
| scaffold1247 |
Augustus |
exon |
56867 |
57172 |
. |
+ |
. |
ID=Dca6302.1.exon4;Parent=Dca6302.1 |
