Dca6437.1
Annotation
- 3-exons
- f-1
- sp|O64473_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g19100#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1251)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6437.1 |
48 |
250 |
351 |
24.78 |
203 |
37 |
4e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O64473_ARATH |
849 |
1086 |
1447 |
16.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6437.1 |
24 |
150 |
351 |
14.24 |
127 |
39 |
9e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
492 |
621 |
626 |
20.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1251 |
Augustus |
mRNA |
69068 |
70855 |
. |
- |
. |
ID=Dca6437.1;Parent=Dca6437 |
| scaffold1251 |
Augustus |
exon |
69068 |
69371 |
. |
- |
. |
ID=Dca6437.1.exon1;Parent=Dca6437.1 |
| scaffold1251 |
Augustus |
exon |
70034 |
70273 |
. |
- |
. |
ID=Dca6437.1.exon2;Parent=Dca6437.1 |
| scaffold1251 |
Augustus |
exon |
70344 |
70855 |
. |
- |
. |
ID=Dca6437.1.exon3;Parent=Dca6437.1 |
