Dca6459.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold1252)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6459.1 |
1 |
357 |
361 |
54.01 |
357 |
51 |
5e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
1115 |
1497 |
1499 |
25.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6459.1 |
1 |
360 |
361 |
36.56 |
360 |
34 |
6e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1096 |
1478 |
1539 |
24.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1252 |
Augustus |
mRNA |
77564 |
78736 |
. |
- |
. |
ID=Dca6459.1;Parent=Dca6459 |
| scaffold1252 |
Augustus |
exon |
77564 |
78478 |
. |
- |
. |
ID=Dca6459.1.exon1;Parent=Dca6459.1 |
| scaffold1252 |
Augustus |
exon |
78566 |
78736 |
. |
- |
. |
ID=Dca6459.1.exon2;Parent=Dca6459.1 |
