Dca6509.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold12547)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6509.1 |
1 |
283 |
283 |
39.22 |
283 |
40 |
1e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
254 |
473 |
964 |
22.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6509.1 |
1 |
109 |
283 |
15.54 |
109 |
40 |
4e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
668 |
779 |
1428 |
7.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12547 |
Augustus |
mRNA |
16601 |
17707 |
. |
- |
. |
ID=Dca6509.1;Parent=Dca6509 |
| scaffold12547 |
Augustus |
exon |
16601 |
17001 |
. |
- |
. |
ID=Dca6509.1.exon1;Parent=Dca6509.1 |
| scaffold12547 |
Augustus |
exon |
17257 |
17707 |
. |
- |
. |
ID=Dca6509.1.exon2;Parent=Dca6509.1 |
