Carnation DB

Dca6544.1

Annotation

7-exons
f-1
sp|B9SI90_RICCO#5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1321820#GO:0003871;GO:0008270;GO:0009086#2F1P0C
Repeat List (scaffold1257)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6544.1	43	167	223	46.63	125	63	3e-43
Target_name	Start	End	Length	Cov(%)
sp\|B9SI90_RICCO	328	494	765	21.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6544.1	44	167	223	44.39	124	60	7e-42
Target_name	Start	End	Length	Cov(%)
AT5G17920.1	329	494	765	21.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1257	Augustus	mRNA	35352	37458	.	+	.	ID=Dca6544.1;Parent=Dca6544
scaffold1257	Augustus	exon	35352	35454	.	+	.	ID=Dca6544.1.exon1;Parent=Dca6544.1
scaffold1257	Augustus	exon	35528	35691	.	+	.	ID=Dca6544.1.exon2;Parent=Dca6544.1
scaffold1257	Augustus	exon	35812	35892	.	+	.	ID=Dca6544.1.exon3;Parent=Dca6544.1
scaffold1257	Augustus	exon	36018	36059	.	+	.	ID=Dca6544.1.exon4;Parent=Dca6544.1
scaffold1257	Augustus	exon	36288	36392	.	+	.	ID=Dca6544.1.exon5;Parent=Dca6544.1
scaffold1257	Augustus	exon	37013	37112	.	+	.	ID=Dca6544.1.exon6;Parent=Dca6544.1
scaffold1257	Augustus	exon	37382	37458	.	+	.	ID=Dca6544.1.exon7;Parent=Dca6544.1