Dca6571.1
Annotation
- 4-exons
- f-2
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12589)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6571.1 |
57 |
316 |
322 |
47.51 |
260 |
50 |
2e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
583 |
893 |
896 |
34.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6571.1 |
88 |
301 |
322 |
22.98 |
214 |
30 |
6e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1137 |
1378 |
1401 |
17.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12589 |
Augustus |
mRNA |
747 |
5429 |
. |
+ |
. |
ID=Dca6571.1;Parent=Dca6571 |
| scaffold12589 |
Augustus |
exon |
747 |
825 |
. |
+ |
. |
ID=Dca6571.1.exon1;Parent=Dca6571.1 |
| scaffold12589 |
Augustus |
exon |
3551 |
3740 |
. |
+ |
. |
ID=Dca6571.1.exon2;Parent=Dca6571.1 |
| scaffold12589 |
Augustus |
exon |
4619 |
4849 |
. |
+ |
. |
ID=Dca6571.1.exon3;Parent=Dca6571.1 |
| scaffold12589 |
Augustus |
exon |
4960 |
5429 |
. |
+ |
. |
ID=Dca6571.1.exon4;Parent=Dca6571.1 |
