Carnation DB

Dca6697.1

Annotation

6-exons
f-1
sp|B9HW55_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_822079#unknown#0F0P0C
Repeat List (scaffold1265)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6697.1	1	248	248	70.56	248	71	4e-98
Target_name	Start	End	Length	Cov(%)
sp\|B9HW55_POPTR	1	249	249	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6697.1	1	248	248	64.91	248	65	4e-94
Target_name	Start	End	Length	Cov(%)
AT1G23110.1	1	248	248	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1265	Augustus	mRNA	48939	52550	.	+	.	ID=Dca6697.1;Parent=Dca6697
scaffold1265	Augustus	exon	48939	49105	.	+	.	ID=Dca6697.1.exon1;Parent=Dca6697.1
scaffold1265	Augus-PASA	exon	49620	49675	.	+	.	ID=Dca6697.1.exon2;Parent=Dca6697.1
scaffold1265	Augus-PASA	exon	49776	49854	.	+	.	ID=Dca6697.1.exon3;Parent=Dca6697.1
scaffold1265	Augus-PASA	exon	49943	50081	.	+	.	ID=Dca6697.1.exon4;Parent=Dca6697.1
scaffold1265	Augus-PASA	exon	51264	51377	.	+	.	ID=Dca6697.1.exon5;Parent=Dca6697.1
scaffold1265	Augus-PASA	exon	52359	52550	.	+	.	ID=Dca6697.1.exon6;Parent=Dca6697.1