Carnation DB

Dca6745.1

Annotation

20-exons
f-1
sp|A6Q0G4_MESCR#Sodium/hydrogen exchanger#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=nhx2#GO:0016021;GO:0015385;GO:0006885#1F1P1C
Repeat List (scaffold1268)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6745.1	414	556	558	13.97	143	55	2e-33
Target_name	Start	End	Length	Cov(%)
sp\|A6Q0G4_MESCR	379	510	526	25.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6745.1	460	558	558	8.6	99	49	1e-18
Target_name	Start	End	Length	Cov(%)
AT1G79610.1	425	514	535	16.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1268	Augustus	mRNA	10191	20831	.	+	.	ID=Dca6745.1;Parent=Dca6745
scaffold1268	Augustus	exon	10191	10377	.	+	.	ID=Dca6745.1.exon1;Parent=Dca6745.1
scaffold1268	Augustus	exon	12204	12256	.	+	.	ID=Dca6745.1.exon2;Parent=Dca6745.1
scaffold1268	Augustus	exon	12361	12446	.	+	.	ID=Dca6745.1.exon3;Parent=Dca6745.1
scaffold1268	Augustus	exon	12550	12661	.	+	.	ID=Dca6745.1.exon4;Parent=Dca6745.1
scaffold1268	Augustus	exon	13731	13793	.	+	.	ID=Dca6745.1.exon5;Parent=Dca6745.1
scaffold1268	Augustus	exon	15004	15026	.	+	.	ID=Dca6745.1.exon6;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	15124	15171	.	+	.	ID=Dca6745.1.exon7;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	15261	15321	.	+	.	ID=Dca6745.1.exon8;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	15403	15500	.	+	.	ID=Dca6745.1.exon9;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	15579	15654	.	+	.	ID=Dca6745.1.exon10;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	15745	15764	.	+	.	ID=Dca6745.1.exon11;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	16309	16406	.	+	.	ID=Dca6745.1.exon12;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	16491	16600	.	+	.	ID=Dca6745.1.exon13;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	17830	17940	.	+	.	ID=Dca6745.1.exon14;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	18060	18160	.	+	.	ID=Dca6745.1.exon15;Parent=Dca6745.1
scaffold1268	Augus-PASA	exon	18264	18343	.	+	.	ID=Dca6745.1.exon16;Parent=Dca6745.1
scaffold1268	Augustus	exon	20113	20162	.	+	.	ID=Dca6745.1.exon17;Parent=Dca6745.1
scaffold1268	Augustus	exon	20310	20420	.	+	.	ID=Dca6745.1.exon18;Parent=Dca6745.1
scaffold1268	Augustus	exon	20540	20640	.	+	.	ID=Dca6745.1.exon19;Parent=Dca6745.1
scaffold1268	Augustus	exon	20744	20831	.	+	.	ID=Dca6745.1.exon20;Parent=Dca6745.1