Carnation DB

Dca6878.1

Annotation

8-exons
f-1
sp|B9GW68_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1073989#unknown#0F0P0C
Repeat List (scaffold1273)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6878.1	171	350	372	29.83	180	60	2e-63
Target_name	Start	End	Length	Cov(%)
sp\|B9GW68_POPTR	78	263	298	62.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6878.1	186	351	372	29.03	166	66	1e-61
Target_name	Start	End	Length	Cov(%)
AT1G12710.1	91	256	291	57.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1273	Augustus	mRNA	74084	78514	.	+	.	ID=Dca6878.1;Parent=Dca6878
scaffold1273	Augustus	exon	74084	74185	.	+	.	ID=Dca6878.1.exon1;Parent=Dca6878.1
scaffold1273	Augustus	exon	74283	74489	.	+	.	ID=Dca6878.1.exon2;Parent=Dca6878.1
scaffold1273	Augustus	exon	74586	74696	.	+	.	ID=Dca6878.1.exon3;Parent=Dca6878.1
scaffold1273	Augustus	exon	75295	75372	.	+	.	ID=Dca6878.1.exon4;Parent=Dca6878.1
scaffold1273	Augustus	exon	76375	76494	.	+	.	ID=Dca6878.1.exon5;Parent=Dca6878.1
scaffold1273	Augustus	exon	76584	76702	.	+	.	ID=Dca6878.1.exon6;Parent=Dca6878.1
scaffold1273	Augustus	exon	77617	77926	.	+	.	ID=Dca6878.1.exon7;Parent=Dca6878.1
scaffold1273	Augustus	exon	78443	78514	.	+	.	ID=Dca6878.1.exon8;Parent=Dca6878.1