Carnation DB

Dca6910.1

Annotation

6-exons
f-1
sp|B9MZ18_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595025#unknown#0F0P0C
sp|G5DF09_9LAMI#Raffinose synthase#Boea hygrometrica#Name=RFS#GO:0047274#1F0P0C
Repeat List (scaffold1275)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6910.1	3	218	646	18.88	216	56	3e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9MZ18_POPTR	4	211	775	26.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6910.1	461	565	646	7.43	105	46	5e-16
Target_name	Start	End	Length	Cov(%)
AT5G40390.1	660	760	783	12.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1275	Augustus	mRNA	73563	78733	.	-	.	ID=Dca6910.1;Parent=Dca6910
scaffold1275	Augustus	exon	73563	73858	.	-	.	ID=Dca6910.1.exon1;Parent=Dca6910.1
scaffold1275	Augustus	exon	74274	74529	.	-	.	ID=Dca6910.1.exon2;Parent=Dca6910.1
scaffold1275	Augustus	exon	74821	75167	.	-	.	ID=Dca6910.1.exon3;Parent=Dca6910.1
scaffold1275	Augustus	exon	75339	75516	.	-	.	ID=Dca6910.1.exon4;Parent=Dca6910.1
scaffold1275	Augustus	exon	77496	77706	.	-	.	ID=Dca6910.1.exon5;Parent=Dca6910.1
scaffold1275	Augustus	exon	78081	78733	.	-	.	ID=Dca6910.1.exon6;Parent=Dca6910.1