Carnation DB

Dca6919.1

Annotation

9-exons
f-1
sp|D7STK1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g00560#GO:0005488#1F0P0C
AT4G32820.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:15831679-15841454 REVERSE LENGTH=1872
Repeat List (scaffold12755)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6919.1	1	703	704	60.22	703	60	0
Target_name	Start	End	Length	Cov(%)
sp\|D7STK1_VITVI	1265	1969	1970	35.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6919.1	2	657	704	54.4	656	58	0
Target_name	Start	End	Length	Cov(%)
AT4G32820.2	1215	1872	1872	35.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12755	Augustus	mRNA	2459	6068	.	-	.	ID=Dca6919.1;Parent=Dca6919
scaffold12755	Augustus	exon	2459	2688	.	-	.	ID=Dca6919.1.exon1;Parent=Dca6919.1
scaffold12755	Augustus	exon	2841	2916	.	-	.	ID=Dca6919.1.exon2;Parent=Dca6919.1
scaffold12755	Augustus	exon	3017	3665	.	-	.	ID=Dca6919.1.exon3;Parent=Dca6919.1
scaffold12755	Augustus	exon	4032	4261	.	-	.	ID=Dca6919.1.exon4;Parent=Dca6919.1
scaffold12755	Augustus	exon	4434	4614	.	-	.	ID=Dca6919.1.exon5;Parent=Dca6919.1
scaffold12755	Augustus	exon	4704	5092	.	-	.	ID=Dca6919.1.exon6;Parent=Dca6919.1
scaffold12755	Augustus	exon	5501	5693	.	-	.	ID=Dca6919.1.exon7;Parent=Dca6919.1
scaffold12755	Augustus	exon	5792	5949	.	-	.	ID=Dca6919.1.exon8;Parent=Dca6919.1
scaffold12755	Augustus	exon	6060	6068	.	-	.	ID=Dca6919.1.exon9;Parent=Dca6919.1