Dca6997.1
Annotation
- 4-exons
- f-754
- sp|B9NER8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595820#unknown#0F0P0C
- Os06t0140200-01 Leucine-rich repeat, plant specific containing protein.
- Repeat List (scaffold128)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6997.1 |
1 |
76 |
109 |
27.52 |
76 |
39 |
5e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G8A1Z7_MEDTR |
1 |
71 |
974 |
7.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6997.1 |
34 |
84 |
109 |
22.93 |
51 |
50 |
4e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0155400-01 |
38 |
85 |
728 |
6.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold128 |
Augustus |
mRNA |
187187 |
192459 |
. |
+ |
. |
ID=Dca6997.1;Parent=Dca6997 |
| scaffold128 |
Augustus |
exon |
187187 |
187412 |
. |
+ |
. |
ID=Dca6997.1.exon1;Parent=Dca6997.1 |
| scaffold128 |
Augustus |
exon |
187963 |
188064 |
. |
+ |
. |
ID=Dca6997.1.exon2;Parent=Dca6997.1 |
| scaffold128 |
Augustus |
exon |
189617 |
192352 |
. |
+ |
. |
ID=Dca6997.1.exon3;Parent=Dca6997.1 |
| scaffold128 |
Augustus |
exon |
192440 |
192459 |
. |
+ |
. |
ID=Dca6997.1.exon4;Parent=Dca6997.1 |
