Carnation DB

Dca7007.1

Annotation

5-exons
f-1
sp|B9S8Q8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0603660#unknown#0F0P0C
Repeat List (scaffold128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7007.1	12	191	192	43.75	180	47	2e-33
Target_name	Start	End	Length	Cov(%)
sp\|B9S8Q8_RICCO	2	175	178	97.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7007.1	2	189	192	41.66	188	41	6e-25
Target_name	Start	End	Length	Cov(%)
Os02t0186700-01	22	215	220	88.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold128	Augus-PASA	mRNA	273906	274850	.	-	.	ID=Dca7007.1;Parent=Dca7007
scaffold128	Augus-PASA	exon	273906	274068	.	-	.	ID=Dca7007.1.exon1;Parent=Dca7007.1
scaffold128	Augus-PASA	exon	274151	274237	.	-	.	ID=Dca7007.1.exon2;Parent=Dca7007.1
scaffold128	Augus-PASA	exon	274321	274503	.	-	.	ID=Dca7007.1.exon3;Parent=Dca7007.1
scaffold128	Augus-PASA	exon	274620	274678	.	-	.	ID=Dca7007.1.exon4;Parent=Dca7007.1
scaffold128	Augus-PASA	exon	274764	274850	.	-	.	ID=Dca7007.1.exon5;Parent=Dca7007.1