Dca7012.1
Annotation
- 4-exons
- f-181
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1280)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7012.1 |
1 |
197 |
199 |
63.31 |
197 |
56 |
1e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
585 |
808 |
896 |
25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7012.1 |
11 |
175 |
199 |
35.17 |
165 |
38 |
3e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1132 |
1318 |
1428 |
13.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1280 |
Augustus |
mRNA |
1167 |
3300 |
. |
+ |
. |
ID=Dca7012.1;Parent=Dca7012 |
| scaffold1280 |
Augustus |
exon |
1167 |
1329 |
. |
+ |
. |
ID=Dca7012.1.exon1;Parent=Dca7012.1 |
| scaffold1280 |
Augustus |
exon |
1513 |
1657 |
. |
+ |
. |
ID=Dca7012.1.exon2;Parent=Dca7012.1 |
| scaffold1280 |
Augustus |
exon |
1745 |
2177 |
. |
+ |
. |
ID=Dca7012.1.exon3;Parent=Dca7012.1 |
| scaffold1280 |
Augustus |
exon |
3262 |
3300 |
. |
+ |
. |
ID=Dca7012.1.exon4;Parent=Dca7012.1 |
