Dca7175.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold12896)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7175.1 |
92 |
603 |
603 |
38.97 |
512 |
42 |
1e-113
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
142 |
674 |
1501 |
35.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7175.1 |
299 |
602 |
603 |
16.91 |
304 |
33 |
1e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
362 |
707 |
43.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12896 |
Augustus |
mRNA |
1 |
2118 |
. |
- |
. |
ID=Dca7175.1;Parent=Dca7175 |
| scaffold12896 |
Augustus |
exon |
1 |
1056 |
. |
- |
. |
ID=Dca7175.1.exon1;Parent=Dca7175.1 |
| scaffold12896 |
Augustus |
exon |
1172 |
1654 |
. |
- |
. |
ID=Dca7175.1.exon2;Parent=Dca7175.1 |
| scaffold12896 |
Augustus |
exon |
1849 |
2118 |
. |
- |
. |
ID=Dca7175.1.exon3;Parent=Dca7175.1 |
