Dca7217.1
Annotation
- 2-exons
- f-1
- sp|Q8S805_ORYSJ#Putative copia-type polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0020E23.19#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1290)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7217.1 |
2 |
658 |
671 |
52.16 |
657 |
51 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8S805_ORYSJ |
643 |
1317 |
1803 |
37.43 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7217.1 |
1 |
657 |
671 |
34.42 |
657 |
33 |
3e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
625 |
1310 |
1401 |
48.96 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1290 |
Augustus |
mRNA |
33125 |
35200 |
. |
- |
. |
ID=Dca7217.1;Parent=Dca7217 |
| scaffold1290 |
Augustus |
exon |
33125 |
33822 |
. |
- |
. |
ID=Dca7217.1.exon1;Parent=Dca7217.1 |
| scaffold1290 |
Augustus |
exon |
33883 |
35200 |
. |
- |
. |
ID=Dca7217.1.exon2;Parent=Dca7217.1 |
