Carnation DB

Dca7340.1

Annotation

11-exons
f-1
sp|B9RH16_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1446010#unknown#0F0P0C
sp|G7KW46_MEDTR#BRO1 domain-containing protein BROX#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g083110#unknown#0F0P0C
Repeat List (scaffold1298)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7340.1	1	391	391	58.05	391	58	4e-135
Target_name	Start	End	Length	Cov(%)
sp\|B9RH16_RICCO	1	397	416	95.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7340.1	1	381	391	57.03	381	57	9e-122
Target_name	Start	End	Length	Cov(%)
AT5G14020.1	1	396	401	98.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1298	Augus-PASA	mRNA	51377	54012	.	+	.	ID=Dca7340.1;Parent=Dca7340
scaffold1298	Augus-PASA	exon	51377	51566	.	+	.	ID=Dca7340.1.exon1;Parent=Dca7340.1
scaffold1298	Augus-PASA	exon	51684	51758	.	+	.	ID=Dca7340.1.exon2;Parent=Dca7340.1
scaffold1298	Augus-PASA	exon	52063	52118	.	+	.	ID=Dca7340.1.exon3;Parent=Dca7340.1
scaffold1298	Augus-PASA	exon	52252	52387	.	+	.	ID=Dca7340.1.exon4;Parent=Dca7340.1
scaffold1298	Augus-PASA	exon	52472	52568	.	+	.	ID=Dca7340.1.exon5;Parent=Dca7340.1
scaffold1298	Augustus	exon	52671	52737	.	+	.	ID=Dca7340.1.exon6;Parent=Dca7340.1
scaffold1298	Augustus	exon	52894	52992	.	+	.	ID=Dca7340.1.exon7;Parent=Dca7340.1
scaffold1298	Augustus	exon	53136	53222	.	+	.	ID=Dca7340.1.exon8;Parent=Dca7340.1
scaffold1298	Augustus	exon	53340	53494	.	+	.	ID=Dca7340.1.exon9;Parent=Dca7340.1
scaffold1298	Augustus	exon	53685	53786	.	+	.	ID=Dca7340.1.exon10;Parent=Dca7340.1
scaffold1298	Augustus	exon	53901	54012	.	+	.	ID=Dca7340.1.exon11;Parent=Dca7340.1