Dca7342.1
Annotation
- 3-exons
- f-1
- sp|Q2QMT9_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g40050#unknown#0F0P0C
- Repeat List (scaffold1298)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7342.1 |
3 |
341 |
342 |
61.4 |
339 |
49 |
4e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QMT9_ORYSJ |
488 |
920 |
989 |
43.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1298 |
Augustus |
mRNA |
61153 |
62463 |
. |
+ |
. |
ID=Dca7342.1;Parent=Dca7342 |
| scaffold1298 |
Augustus |
exon |
61153 |
61744 |
. |
+ |
. |
ID=Dca7342.1.exon1;Parent=Dca7342.1 |
| scaffold1298 |
Augustus |
exon |
61856 |
61984 |
. |
+ |
. |
ID=Dca7342.1.exon2;Parent=Dca7342.1 |
| scaffold1298 |
Augustus |
exon |
62156 |
62463 |
. |
+ |
. |
ID=Dca7342.1.exon3;Parent=Dca7342.1 |
