Carnation DB

Dca7380.1

Annotation

10-exons
f-1
sp|A5C4W2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_036910#unknown#0F0P0C
AT1G60995.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | chr1:22465768-22470575 REVERSE LENGTH=623
Repeat List (scaffold13)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7380.1	1	571	573	66.66	571	57	0
Target_name	Start	End	Length	Cov(%)
sp\|A5C4W2_VITVI	1	671	673	99.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7380.1	1	563	573	59.33	563	51	2e-157
Target_name	Start	End	Length	Cov(%)
AT1G60995.1	1	613	623	98.39

seqname	source	feature	start	end	score	strand	frame	group
scaffold13	Augustus	mRNA	139197	146382	.	+	.	ID=Dca7380.1;Parent=Dca7380
scaffold13	Augustus	exon	139197	139349	.	+	.	ID=Dca7380.1.exon1;Parent=Dca7380.1
scaffold13	Augustus	exon	140561	140623	.	+	.	ID=Dca7380.1.exon2;Parent=Dca7380.1
scaffold13	Augustus	exon	140946	141365	.	+	.	ID=Dca7380.1.exon3;Parent=Dca7380.1
scaffold13	Augustus	exon	142703	142797	.	+	.	ID=Dca7380.1.exon4;Parent=Dca7380.1
scaffold13	Augustus	exon	143268	143347	.	+	.	ID=Dca7380.1.exon5;Parent=Dca7380.1
scaffold13	Augustus	exon	143975	144114	.	+	.	ID=Dca7380.1.exon6;Parent=Dca7380.1
scaffold13	Augustus	exon	145065	145171	.	+	.	ID=Dca7380.1.exon7;Parent=Dca7380.1
scaffold13	Augustus	exon	145292	145383	.	+	.	ID=Dca7380.1.exon8;Parent=Dca7380.1
scaffold13	Augustus	exon	145486	145562	.	+	.	ID=Dca7380.1.exon9;Parent=Dca7380.1
scaffold13	Augustus	exon	145888	146382	.	+	.	ID=Dca7380.1.exon10;Parent=Dca7380.1