Carnation DB

Dca7405.1

Annotation

13-exons
f-1
sp|A9PEC9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_729432#GO:0005783;GO:0005509;GO:0051082;GO:0006457#2F1P1C
AT1G09210.1 | Symbols: CRT1b, AtCRT1b | calreticulin 1b | chr1:2973217-2976655 REVERSE LENGTH=424
Repeat List (scaffold13)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7405.1	7	424	424	78.53	418	80	4e-179
Target_name	Start	End	Length	Cov(%)
sp\|A9PEC9_POPTR	3	414	414	99.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7405.1	12	369	424	70.75	358	84	7e-172
Target_name	Start	End	Length	Cov(%)
AT1G09210.1	7	363	424	84.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13	Augus-PASA	mRNA	383238	386846	.	+	.	ID=Dca7405.1;Parent=Dca7405
scaffold13	Augus-PASA	exon	383238	383349	.	+	.	ID=Dca7405.1.exon1;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	384454	384561	.	+	.	ID=Dca7405.1.exon2;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	384655	384847	.	+	.	ID=Dca7405.1.exon3;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	384943	385201	.	+	.	ID=Dca7405.1.exon4;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	385288	385392	.	+	.	ID=Dca7405.1.exon5;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	385599	385685	.	+	.	ID=Dca7405.1.exon6;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	385797	385854	.	+	.	ID=Dca7405.1.exon7;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	385933	386000	.	+	.	ID=Dca7405.1.exon8;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	386112	386207	.	+	.	ID=Dca7405.1.exon9;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	386318	386365	.	+	.	ID=Dca7405.1.exon10;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	386511	386540	.	+	.	ID=Dca7405.1.exon11;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	386636	386734	.	+	.	ID=Dca7405.1.exon12;Parent=Dca7405.1
scaffold13	Augus-PASA	exon	386835	386846	.	+	.	ID=Dca7405.1.exon13;Parent=Dca7405.1