Carnation DB

Dca7474.1

Annotation

10-exons
f-1
sp|E0CVB6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g01040#GO:0003676;GO:0000166#2F0P0C
sp|B9T1D4_RICCO#RNA-binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0444630#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold1300)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7474.1	105	378	382	56.54	274	78	4e-122
Target_name	Start	End	Length	Cov(%)
sp\|E0CVB6_VITVI	81	357	361	76.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7474.1	290	377	382	9.94	88	44	3e-13
Target_name	Start	End	Length	Cov(%)
AT4G10610.1	146	232	336	25.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1300	Augustus	mRNA	35054	37666	.	+	.	ID=Dca7474.1;Parent=Dca7474
scaffold1300	Augustus	exon	35054	35563	.	+	.	ID=Dca7474.1.exon1;Parent=Dca7474.1
scaffold1300	Augustus	exon	35666	35776	.	+	.	ID=Dca7474.1.exon2;Parent=Dca7474.1
scaffold1300	Augustus	exon	35874	35918	.	+	.	ID=Dca7474.1.exon3;Parent=Dca7474.1
scaffold1300	Augustus	exon	36018	36090	.	+	.	ID=Dca7474.1.exon4;Parent=Dca7474.1
scaffold1300	Augustus	exon	36197	36309	.	+	.	ID=Dca7474.1.exon5;Parent=Dca7474.1
scaffold1300	Augustus	exon	36405	36464	.	+	.	ID=Dca7474.1.exon6;Parent=Dca7474.1
scaffold1300	Augustus	exon	36552	36599	.	+	.	ID=Dca7474.1.exon7;Parent=Dca7474.1
scaffold1300	Augustus	exon	36682	36750	.	+	.	ID=Dca7474.1.exon8;Parent=Dca7474.1
scaffold1300	Augustus	exon	37450	37511	.	+	.	ID=Dca7474.1.exon9;Parent=Dca7474.1
scaffold1300	Augustus	exon	37609	37666	.	+	.	ID=Dca7474.1.exon10;Parent=Dca7474.1