Carnation DB

Dca78.1

Annotation

7-exons
f-1
sp|F6I363_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g01100#GO:0005524;GO:0016887;GO:0071722#2F1P0C
sp|B9RDI9_RICCO#Arsenical pump-driving atpase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1613490#GO:0015446;GO:0005524;GO:0071722#2F1P0C
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca78.1	3	358	359	81.05	356	82	2e-167
Target_name	Start	End	Length	Cov(%)
sp\|F6I363_VITVI	2	356	365	97.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca78.1	5	359	359	78.83	355	80	2e-163
Target_name	Start	End	Length	Cov(%)
Os09t0521500-01	7	361	362	98.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augustus	mRNA	740292	743338	.	-	.	ID=Dca78.1;Parent=Dca78
scaffold1	Augustus	exon	740292	740468	.	-	.	ID=Dca78.1.exon1;Parent=Dca78.1
scaffold1	Augustus	exon	740559	740674	.	-	.	ID=Dca78.1.exon2;Parent=Dca78.1
scaffold1	Augustus	exon	740777	740915	.	-	.	ID=Dca78.1.exon3;Parent=Dca78.1
scaffold1	Augustus	exon	741083	741193	.	-	.	ID=Dca78.1.exon4;Parent=Dca78.1
scaffold1	Augustus	exon	741325	741475	.	-	.	ID=Dca78.1.exon5;Parent=Dca78.1
scaffold1	Augustus	exon	741651	741772	.	-	.	ID=Dca78.1.exon6;Parent=Dca78.1
scaffold1	Augustus	exon	743075	743338	.	-	.	ID=Dca78.1.exon7;Parent=Dca78.1