Carnation DB

Dca8045.1

Annotation

9-exons
f-1
sp|F6H136_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g07550#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
AT5G60930.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:24515398-24522511 REVERSE LENGTH=1294
Repeat List (scaffold13317)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8045.1	157	353	394	28.17	197	55	4e-50
Target_name	Start	End	Length	Cov(%)
sp\|F6H136_VITVI	277	480	1194	17.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8045.1	157	280	394	21.57	124	69	1e-42
Target_name	Start	End	Length	Cov(%)
AT5G60930.1	338	460	1294	9.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13317	Augustus	mRNA	245	3727	.	-	.	ID=Dca8045.1;Parent=Dca8045
scaffold13317	Augustus	exon	245	346	.	-	.	ID=Dca8045.1.exon1;Parent=Dca8045.1
scaffold13317	Augustus	exon	482	513	.	-	.	ID=Dca8045.1.exon2;Parent=Dca8045.1
scaffold13317	Augustus	exon	915	1132	.	-	.	ID=Dca8045.1.exon3;Parent=Dca8045.1
scaffold13317	Augustus	exon	1233	1282	.	-	.	ID=Dca8045.1.exon4;Parent=Dca8045.1
scaffold13317	Augustus	exon	1370	1483	.	-	.	ID=Dca8045.1.exon5;Parent=Dca8045.1
scaffold13317	Augustus	exon	1569	1685	.	-	.	ID=Dca8045.1.exon6;Parent=Dca8045.1
scaffold13317	Augustus	exon	1803	1884	.	-	.	ID=Dca8045.1.exon7;Parent=Dca8045.1
scaffold13317	Augustus	exon	2173	2430	.	-	.	ID=Dca8045.1.exon8;Parent=Dca8045.1
scaffold13317	Augustus	exon	3516	3727	.	-	.	ID=Dca8045.1.exon9;Parent=Dca8045.1