Dca806.1
Annotation
- 3-exons
- f-1
- sp|Q2R2I1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g35740#unknown#0F0P0C
- Repeat List (scaffold102)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca806.1 |
118 |
643 |
643 |
37.94 |
526 |
41 |
2e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R2I1_ORYSJ |
279 |
851 |
1064 |
53.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca806.1 |
414 |
643 |
643 |
15.55 |
230 |
40 |
3e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
98 |
343 |
1262 |
19.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold102 |
Augustus |
mRNA |
269688 |
272445 |
. |
- |
. |
ID=Dca806.1;Parent=Dca806 |
| scaffold102 |
Augustus |
exon |
269688 |
270592 |
. |
- |
. |
ID=Dca806.1.exon1;Parent=Dca806.1 |
| scaffold102 |
Augustus |
exon |
271329 |
272051 |
. |
- |
. |
ID=Dca806.1.exon2;Parent=Dca806.1 |
| scaffold102 |
Augustus |
exon |
272142 |
272445 |
. |
- |
. |
ID=Dca806.1.exon3;Parent=Dca806.1 |
