Carnation DB

Dca8079.1

Annotation

5-exons
f-1
sp|B9HJH7_POPTR#Rna-dependent RNA polymerase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=RDR902#GO:0003676;GO:0000166;GO:0003968#3F0P0C
Repeat List (scaffold1334)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8079.1	65	1191	1197	62.4	1127	66	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HJH7_POPTR	1	1126	1133	99.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8079.1	65	1189	1197	58.81	1125	63	0
Target_name	Start	End	Length	Cov(%)
AT1G14790.1	1	1099	1107	99.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1334	Augustus	mRNA	2595	8597	.	+	.	ID=Dca8079.1;Parent=Dca8079
scaffold1334	Augustus	exon	2595	2759	.	+	.	ID=Dca8079.1.exon1;Parent=Dca8079.1
scaffold1334	Augustus	exon	4170	4718	.	+	.	ID=Dca8079.1.exon2;Parent=Dca8079.1
scaffold1334	Augustus	exon	5031	6925	.	+	.	ID=Dca8079.1.exon3;Parent=Dca8079.1
scaffold1334	Augustus	exon	7433	7583	.	+	.	ID=Dca8079.1.exon4;Parent=Dca8079.1
scaffold1334	Augustus	exon	7764	8597	.	+	.	ID=Dca8079.1.exon5;Parent=Dca8079.1