Dca8165.1
Annotation
- 3-exons
- f-1
- sp|B9IG77_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_576951#GO:0016831;GO:0030170;GO:0006520#2F1P0C
- Os10t0400500-00 Similar to Pyridoxal-dependent decarboxylase conserved domain containing protein, expressed.
- Repeat List (scaffold134)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8165.1 |
5 |
491 |
494 |
58.5 |
487 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IG77_POPTR |
4 |
489 |
494 |
98.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8165.1 |
8 |
491 |
494 |
53.03 |
484 |
53 |
5e-154
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0400500-00 |
6 |
501 |
503 |
98.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold134 |
Augustus |
mRNA |
49524 |
52357 |
. |
+ |
. |
ID=Dca8165.1;Parent=Dca8165 |
| scaffold134 |
Augustus |
exon |
49524 |
49992 |
. |
+ |
. |
ID=Dca8165.1.exon1;Parent=Dca8165.1 |
| scaffold134 |
Augustus |
exon |
50607 |
50987 |
. |
+ |
. |
ID=Dca8165.1.exon2;Parent=Dca8165.1 |
| scaffold134 |
Augustus |
exon |
51723 |
52357 |
. |
+ |
. |
ID=Dca8165.1.exon3;Parent=Dca8165.1 |
