Dca8166.1
Annotation
- 3-exons
- f-1
- sp|B9IG77_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_576951#GO:0016831;GO:0030170;GO:0006520#2F1P0C
- Os10t0400500-00 Similar to Pyridoxal-dependent decarboxylase conserved domain containing protein, expressed.
- Repeat List (scaffold134)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8166.1 |
5 |
486 |
511 |
56.75 |
482 |
61 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IG77_POPTR |
4 |
484 |
494 |
97.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8166.1 |
8 |
489 |
511 |
50.88 |
482 |
53 |
1e-156
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0400500-00 |
6 |
499 |
503 |
98.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold134 |
Augustus |
mRNA |
64640 |
69200 |
. |
+ |
. |
ID=Dca8166.1;Parent=Dca8166 |
| scaffold134 |
Augustus |
exon |
64640 |
65108 |
. |
+ |
. |
ID=Dca8166.1.exon1;Parent=Dca8166.1 |
| scaffold134 |
Augustus |
exon |
67839 |
68219 |
. |
+ |
. |
ID=Dca8166.1.exon2;Parent=Dca8166.1 |
| scaffold134 |
Augus-PASA |
exon |
68515 |
69200 |
. |
+ |
. |
ID=Dca8166.1.exon3;Parent=Dca8166.1 |
