Dca8220.1
Annotation
- 3-exons
- f-1
- sp|A5BNR5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_035665#GO:0003676;GO:0000166;GO:0016491;GO:0008270;GO:0015074#4F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1342)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8220.1 |
2 |
1403 |
1436 |
38.85 |
1402 |
37 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BNR5_VITVI |
290 |
1721 |
1813 |
78.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8220.1 |
345 |
1390 |
1436 |
22.77 |
1046 |
30 |
2e-134
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
361 |
1405 |
1428 |
73.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1342 |
Augustus |
mRNA |
33814 |
38364 |
. |
+ |
. |
ID=Dca8220.1;Parent=Dca8220 |
| scaffold1342 |
Augustus |
exon |
33814 |
34614 |
. |
+ |
. |
ID=Dca8220.1.exon1;Parent=Dca8220.1 |
| scaffold1342 |
Augustus |
exon |
34732 |
36756 |
. |
+ |
. |
ID=Dca8220.1.exon2;Parent=Dca8220.1 |
| scaffold1342 |
Augustus |
exon |
36880 |
38364 |
. |
+ |
. |
ID=Dca8220.1.exon3;Parent=Dca8220.1 |
