Carnation DB

Dca8269.1

Annotation

6-exons
f-1
sp|B9I1N4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_834077#unknown#0F0P0C
AT4G18570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:10231439-10234534 FORWARD LENGTH=642
Repeat List (scaffold1345)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8269.1	1	553	555	59.63	553	55	3e-135
Target_name	Start	End	Length	Cov(%)
sp\|B9I1N4_POPTR	1	609	613	99.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8269.1	271	552	555	40	282	77	1e-120
Target_name	Start	End	Length	Cov(%)
AT4G18570.1	348	637	642	45.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1345	Augustus	mRNA	91271	96957	.	-	.	ID=Dca8269.1;Parent=Dca8269
scaffold1345	Augustus	exon	91271	91396	.	-	.	ID=Dca8269.1.exon1;Parent=Dca8269.1
scaffold1345	Augustus	exon	91504	91638	.	-	.	ID=Dca8269.1.exon2;Parent=Dca8269.1
scaffold1345	Augustus	exon	93500	93611	.	-	.	ID=Dca8269.1.exon3;Parent=Dca8269.1
scaffold1345	Augustus	exon	93705	93886	.	-	.	ID=Dca8269.1.exon4;Parent=Dca8269.1
scaffold1345	Augustus	exon	94044	94175	.	-	.	ID=Dca8269.1.exon5;Parent=Dca8269.1
scaffold1345	Augustus	exon	95977	96957	.	-	.	ID=Dca8269.1.exon6;Parent=Dca8269.1