Dca8322.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1349)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8322.1 |
182 |
949 |
1575 |
26.98 |
768 |
55 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
11 |
743 |
1717 |
42.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8322.1 |
1257 |
1575 |
1575 |
7.49 |
319 |
37 |
5e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
237 |
536 |
707 |
42.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1349 |
Augustus |
mRNA |
1 |
6334 |
. |
- |
. |
ID=Dca8322.1;Parent=Dca8322 |
| scaffold1349 |
Augustus |
exon |
1 |
1596 |
. |
- |
. |
ID=Dca8322.1.exon1;Parent=Dca8322.1 |
| scaffold1349 |
Augustus |
exon |
1693 |
4441 |
. |
- |
. |
ID=Dca8322.1.exon2;Parent=Dca8322.1 |
| scaffold1349 |
Augustus |
exon |
5955 |
6334 |
. |
- |
. |
ID=Dca8322.1.exon3;Parent=Dca8322.1 |
