Carnation DB

Dca841.1

Annotation

5-exons
f-1
sp|B9I741_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1097107#GO:0016773#1F0P0C
AT4G27600.1 | Symbols: NARA5 | pfkB-like carbohydrate kinase family protein | chr4:13782753-13785005 REVERSE LENGTH=471
Repeat List (scaffold1021)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca841.1	108	454	454	62.33	347	82	2e-166
Target_name	Start	End	Length	Cov(%)
sp\|B9I741_POPTR	107	453	465	74.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca841.1	91	454	454	60.35	364	74	6e-160
Target_name	Start	End	Length	Cov(%)
AT4G27600.1	94	465	471	78.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1021	Augus-PASA	mRNA	12715	16222	.	-	.	ID=Dca841.1;Parent=Dca841
scaffold1021	Augus-PASA	exon	12715	13132	.	-	.	ID=Dca841.1.exon1;Parent=Dca841.1
scaffold1021	Augus-PASA	exon	13753	13961	.	-	.	ID=Dca841.1.exon2;Parent=Dca841.1
scaffold1021	Augus-PASA	exon	15255	15372	.	-	.	ID=Dca841.1.exon3;Parent=Dca841.1
scaffold1021	Augus-PASA	exon	15504	15766	.	-	.	ID=Dca841.1.exon4;Parent=Dca841.1
scaffold1021	Augustus	exon	15866	16222	.	-	.	ID=Dca841.1.exon5;Parent=Dca841.1