Carnation DB

Dca8444.1

Annotation

8-exons
f-1
sp|D7MB15_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_490928#GO:0003676;GO:0008270#2F0P0C
AT1G65660.1 | Symbols: SMP1 | Pre-mRNA splicing Prp18-interacting factor | chr1:24418295-24421231 REVERSE LENGTH=535
Repeat List (scaffold1355)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8444.1	13	496	496	74.59	484	70	0
Target_name	Start	End	Length	Cov(%)
sp\|D7MB15_ARALL	6	535	536	98.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8444.1	13	496	496	73.99	484	70	0
Target_name	Start	End	Length	Cov(%)
AT1G65660.1	6	535	535	99.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1355	Augustus	mRNA	25128	28416	.	+	.	ID=Dca8444.1;Parent=Dca8444
scaffold1355	Augustus	exon	25128	25328	.	+	.	ID=Dca8444.1.exon1;Parent=Dca8444.1
scaffold1355	Augustus	exon	25422	25534	.	+	.	ID=Dca8444.1.exon2;Parent=Dca8444.1
scaffold1355	Augustus	exon	26211	26486	.	+	.	ID=Dca8444.1.exon3;Parent=Dca8444.1
scaffold1355	Augustus	exon	26737	26872	.	+	.	ID=Dca8444.1.exon4;Parent=Dca8444.1
scaffold1355	Augustus	exon	26953	27252	.	+	.	ID=Dca8444.1.exon5;Parent=Dca8444.1
scaffold1355	Augustus	exon	27355	27571	.	+	.	ID=Dca8444.1.exon6;Parent=Dca8444.1
scaffold1355	Augustus	exon	28056	28159	.	+	.	ID=Dca8444.1.exon7;Parent=Dca8444.1
scaffold1355	Augustus	exon	28273	28416	.	+	.	ID=Dca8444.1.exon8;Parent=Dca8444.1