Carnation DB

Dca8536.1

Annotation

5-exons
f-1
sp|B9T3A8_RICCO#Lsm1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0392140#unknown#0F0P0C
Repeat List (scaffold136)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8536.1	1	128	128	87.5	128	88	6e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9T3A8_RICCO	1	128	128	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8536.1	1	128	128	82.81	128	83	2e-59
Target_name	Start	End	Length	Cov(%)
AT3G14080.1	1	128	128	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold136	Augus-PASA	mRNA	180221	182072	.	+	.	ID=Dca8536.1;Parent=Dca8536
scaffold136	Augus-PASA	exon	180221	180281	.	+	.	ID=Dca8536.1.exon1;Parent=Dca8536.1
scaffold136	Augus-PASA	exon	181171	181239	.	+	.	ID=Dca8536.1.exon2;Parent=Dca8536.1
scaffold136	Augus-PASA	exon	181325	181440	.	+	.	ID=Dca8536.1.exon3;Parent=Dca8536.1
scaffold136	Augus-PASA	exon	181531	181593	.	+	.	ID=Dca8536.1.exon4;Parent=Dca8536.1
scaffold136	Augus-PASA	exon	181995	182072	.	+	.	ID=Dca8536.1.exon5;Parent=Dca8536.1