Carnation DB

Dca873.1

Annotation

7-exons
f-1
sp|B9HNI6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_804410#unknown#0F0P0C
AT5G12220.1 | Symbols: | las1-like family protein | chr5:3950218-3953014 FORWARD LENGTH=611
Repeat List (scaffold1022)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca873.1	9	598	603	41.29	590	41	6e-98
Target_name	Start	End	Length	Cov(%)
sp\|B9HNI6_POPTR	19	617	617	97.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca873.1	20	528	603	34.32	509	40	1e-73
Target_name	Start	End	Length	Cov(%)
AT5G12220.1	29	523	611	81.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1022	Augustus	mRNA	83698	88844	.	-	.	ID=Dca873.1;Parent=Dca873
scaffold1022	Augustus	exon	83698	84569	.	-	.	ID=Dca873.1.exon1;Parent=Dca873.1
scaffold1022	Augustus	exon	85377	85688	.	-	.	ID=Dca873.1.exon2;Parent=Dca873.1
scaffold1022	Augustus	exon	86979	87153	.	-	.	ID=Dca873.1.exon3;Parent=Dca873.1
scaffold1022	Augustus	exon	87674	87729	.	-	.	ID=Dca873.1.exon4;Parent=Dca873.1
scaffold1022	Augustus	exon	87987	88093	.	-	.	ID=Dca873.1.exon5;Parent=Dca873.1
scaffold1022	Augustus	exon	88304	88440	.	-	.	ID=Dca873.1.exon6;Parent=Dca873.1
scaffold1022	Augustus	exon	88692	88844	.	-	.	ID=Dca873.1.exon7;Parent=Dca873.1