Dca8927.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold138)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8927.1 |
46 |
125 |
126 |
59.52 |
80 |
94 |
9e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
1227 |
1306 |
1307 |
6.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8927.1 |
46 |
126 |
126 |
24.6 |
81 |
37 |
6e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1339 |
1422 |
1428 |
5.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold138 |
Augustus |
mRNA |
375775 |
378956 |
. |
- |
. |
ID=Dca8927.1;Parent=Dca8927 |
| scaffold138 |
Augustus |
exon |
375775 |
376028 |
. |
- |
. |
ID=Dca8927.1.exon1;Parent=Dca8927.1 |
| scaffold138 |
Augustus |
exon |
378830 |
378956 |
. |
- |
. |
ID=Dca8927.1.exon2;Parent=Dca8927.1 |
