Carnation DB

Dca9115.1

Annotation

6-exons
f-1
sp|F2CT83_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#GO:0015031#0F1P0C
AT2G19830.1 | Symbols: SNF7.2, VPS32 | SNF7 family protein | chr2:8558101-8559389 REVERSE LENGTH=213
Repeat List (scaffold139)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9115.1	1	219	219	66.21	219	66	3e-74
Target_name	Start	End	Length	Cov(%)
sp\|F2CT83_HORVD	4	222	222	98.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9115.1	18	219	219	70.31	202	77	5e-73
Target_name	Start	End	Length	Cov(%)
AT2G19830.1	15	213	213	93.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold139	Augustus	mRNA	96855	100955	.	-	.	ID=Dca9115.1;Parent=Dca9115
scaffold139	Augustus	exon	96855	97040	.	-	.	ID=Dca9115.1.exon1;Parent=Dca9115.1
scaffold139	Augustus	exon	97121	97232	.	-	.	ID=Dca9115.1.exon2;Parent=Dca9115.1
scaffold139	Augustus	exon	97405	97496	.	-	.	ID=Dca9115.1.exon3;Parent=Dca9115.1
scaffold139	Augustus	exon	97716	97801	.	-	.	ID=Dca9115.1.exon4;Parent=Dca9115.1
scaffold139	Augustus	exon	98737	98836	.	-	.	ID=Dca9115.1.exon5;Parent=Dca9115.1
scaffold139	Augustus	exon	100872	100955	.	-	.	ID=Dca9115.1.exon6;Parent=Dca9115.1