Carnation DB

Dca9213.1

Annotation

6-exons
f-1
sp|B9I2H9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_892254#GO:0015297;GO:0015238#2F0P0C
Os06t0494400-01 Multi antimicrobial extrusion protein MatE family protein.
Repeat List (scaffold13944)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9213.1	1	359	378	67.46	359	67	1e-149
Target_name	Start	End	Length	Cov(%)
sp\|B9I2H9_POPTR	96	481	483	79.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9213.1	1	376	378	59.52	376	57	4e-132
Target_name	Start	End	Length	Cov(%)
Os06t0494400-01	94	488	491	80.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13944	Augustus	mRNA	1463	3217	.	-	.	ID=Dca9213.1;Parent=Dca9213
scaffold13944	Augustus	exon	1463	1522	.	-	.	ID=Dca9213.1.exon1;Parent=Dca9213.1
scaffold13944	Augustus	exon	1633	1719	.	-	.	ID=Dca9213.1.exon2;Parent=Dca9213.1
scaffold13944	Augustus	exon	1801	1919	.	-	.	ID=Dca9213.1.exon3;Parent=Dca9213.1
scaffold13944	Augustus	exon	2002	2240	.	-	.	ID=Dca9213.1.exon4;Parent=Dca9213.1
scaffold13944	Augustus	exon	2492	2578	.	-	.	ID=Dca9213.1.exon5;Parent=Dca9213.1
scaffold13944	Augustus	exon	2673	3217	.	-	.	ID=Dca9213.1.exon6;Parent=Dca9213.1