Carnation DB

Dca9335.1

Annotation

6-exons
f-1
sp|B9H3W4_POPTR#Pectinesterase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_818003#GO:0005618;GO:0045330;GO:0030599;GO:0042545#2F1P1C
Repeat List (scaffold14)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9335.1	62	375	375	68.26	314	82	1e-160
Target_name	Start	End	Length	Cov(%)
sp\|B9H3W4_POPTR	3	316	316	99.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9335.1	63	375	375	66.4	313	80	8e-161
Target_name	Start	End	Length	Cov(%)
AT3G29090.1	5	317	317	98.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold14	Augus-PASA	mRNA	364956	367293	.	+	.	ID=Dca9335.1;Parent=Dca9335
scaffold14	Augus-PASA	exon	364956	365375	.	+	.	ID=Dca9335.1.exon1;Parent=Dca9335.1
scaffold14	Augus-PASA	exon	365474	365578	.	+	.	ID=Dca9335.1.exon2;Parent=Dca9335.1
scaffold14	Augus-PASA	exon	365665	365742	.	+	.	ID=Dca9335.1.exon3;Parent=Dca9335.1
scaffold14	Augus-PASA	exon	365874	366061	.	+	.	ID=Dca9335.1.exon4;Parent=Dca9335.1
scaffold14	Augus-PASA	exon	366618	366791	.	+	.	ID=Dca9335.1.exon5;Parent=Dca9335.1
scaffold14	Augus-PASA	exon	367131	367293	.	+	.	ID=Dca9335.1.exon6;Parent=Dca9335.1