Carnation DB

Dca9373.1

Annotation

5-exons
f-1
sp|F6HIY7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0047g01120#unknown#0F0P0C
AT5G18440.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink). | chr5:6113092-6115748 FORWARD LENGTH=470
Repeat List (scaffold140)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9373.1	34	242	269	37.91	209	47	2e-40
Target_name	Start	End	Length	Cov(%)
sp\|F6HIY7_VITVI	162	373	438	48.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9373.1	39	251	269	37.54	213	46	4e-39
Target_name	Start	End	Length	Cov(%)
AT5G18440.1	250	449	470	42.55

seqname	source	feature	start	end	score	strand	frame	group
scaffold140	Augustus	mRNA	103745	107630	.	-	.	ID=Dca9373.1;Parent=Dca9373
scaffold140	Augustus	exon	103745	104278	.	-	.	ID=Dca9373.1.exon1;Parent=Dca9373.1
scaffold140	Augustus	exon	106014	106076	.	-	.	ID=Dca9373.1.exon2;Parent=Dca9373.1
scaffold140	Augustus	exon	106156	106246	.	-	.	ID=Dca9373.1.exon3;Parent=Dca9373.1
scaffold140	Augustus	exon	106423	106480	.	-	.	ID=Dca9373.1.exon4;Parent=Dca9373.1
scaffold140	Augustus	exon	107567	107630	.	-	.	ID=Dca9373.1.exon5;Parent=Dca9373.1