Dca9377.1
Annotation
- 2-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold140)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9377.1 |
16 |
431 |
433 |
36.02 |
416 |
35 |
7e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
12 |
459 |
1296 |
34.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9377.1 |
7 |
298 |
433 |
24.01 |
292 |
35 |
9e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
4 |
290 |
369 |
77.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold140 |
Augustus |
mRNA |
155008 |
156416 |
. |
- |
. |
ID=Dca9377.1;Parent=Dca9377 |
| scaffold140 |
Augustus |
exon |
155008 |
155325 |
. |
- |
. |
ID=Dca9377.1.exon1;Parent=Dca9377.1 |
| scaffold140 |
Augustus |
exon |
155433 |
156416 |
. |
- |
. |
ID=Dca9377.1.exon2;Parent=Dca9377.1 |
